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Pedigree and SSR Data Analysis Reveal Dominant Prevalence of Few Parents in Pedigrees of Pakistani Wheat Varieties

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ABSTRACT
The international recognition of the importance of genetic diversity demands continuous estimation of genetic diversity of in hand population as test of its buffering capacity against all putative threats. Randomly selected Pakistani wheat varieties developed during 1965-1999 and 2000-2011 were evaluated on the basis of pedigree and SSR data. At 2nd and 3rd levels of pedigree, average occurrence of a parent per variety was 2.1 times. The dominating parents included BLUEBIRD, KALYANSONA and SIETE-CERROS-66, which were present in the pedigrees of 71.42%, 64.28%, and 58.57% varieties, respectively. The varieties INQLAB-91 and KIRAN-95 had the same pedigree and were genetically identical as revealed by SSR data. Similarly, varieties PAVON-76 and SOGHAT-90 also had the same parents in their pedigrees. This genetic similarity was also confirmed by SSR based cluster. The SSR based PC1 and PC2 showed narrow genetic diversity confirming the presence of few dominating parents. The results emphasize the inclusion of novel and genetically diverse parents in Pakistani wheat breeding programs to maintain broader genetic base of varieties/cultivars for buffering the effects of ever changing virulent pathogens and crop growth environments.
 
Cite this paper
Sajjad, M. , Khan, S. and Maqbool, R. (2015) Pedigree and SSR Data Analysis Reveal Dominant Prevalence of Few Parents in Pedigrees of Pakistani Wheat Varieties. American Journal of Molecular Biology, 5, 1-6. doi: 10.4236/ajmb.2015.51001.
 
References
[1]Sajjad, M., Khan, S.H. and Khan, A.S. (2011) Exploitation of Germplasm for Grain Yield Improvement in Spring Wheat (Triticum aestivum). International Journal of Agriculture and Biology, 13, 695-700.
 
[2]Cox, T.S., Murphy, J.P. and Rodgers, M.D. (1986) Changes in Genetic Diversity in the Red Winter Wheat Region of the United States. Proceedings of the National Academy of Sciences of the United States of America, 83, 5583-5586. http://dx.doi.org/10.1073/pnas.83.15.5583
 
[3]Rehman, A., Sajjad, M., Khan, S.H., Peña Bautista, R.J. and Khan, N.I. (2014) Lower Tendency of Allelic Variation of Glu Genes and Absence of 1BL-1RS Translocation in Modern Pakistani Wheats. Cereal Research Communications, 42, 139-150. http://dx.doi.org/10.1556/CRC.2013.0050
 
[4]Sajjad, M., Khan, S.H., Maqbool, R., Ather, A. and Iqbal, N. (2012) Selection of Pakistani and CIMMYT Wheat Lines for Better Grain Yield and Quality. International Journal of Agriculture and Biology, 14, 645-649.
 
[5]Kumar, B., Lal, G.M.R. and Upadhyay, A. (2009) Genetic Variability, Diversity and Association of Quantitative Traits with Grain Yield in Bread Wheat (Triticum aestivum L.). Asian Journal of Agricultural Sciences, 1, 4-6.
 
[6]Tahir, M., Turchelta, T., Anarw, R. and Lafiandra, D. (1996) Assessment of Genetic Variability in Hexaploid Wheat Landraces of Pakistan Based on Polymorphism for High Molecular Weight Glutenin Subunits. Genetic Resources and Crop Evolution, 43, 211-220. http://dx.doi.org/10.1007/BF00123273
 
[7]Maric, S., Bede, M., Martincic, J. and Guberac, V. (1998) Variability of Some Winter Wheat Traits from Breeding Process. Sjemenarstvo, 15, 421-433.
 
[8]Martin, J.M., Talbert, L.E., Lannings, S.P. and Blake, N.K. (1995) Hybrid Performance in Wheat as Related to Parental Diversity. Crop Science, 35, 104-108.
http://dx.doi.org/10.2135/cropsci1995.0011183X003500010019x
 
[9]Barrett, B.A. and Kidwell, K.K. (1998) Comparison of AFLP and Pedigree-Based Genetic Diversity Assessment Methods Using Wheat Cultivars from the Pacific Northwest. Crop Science, 38, 1271-1278. http://dx.doi.org/10.2135/cropsci1998.0011183X003800050026x
 
[10]Soleimani, V.D., Baum, B.R. and Johnson, D.A. (2002) AFLP and Pedigree-Based Genetic Diversity Estimates in Modern Cultivars of Durum Wheat [Triticum turgidum L. Subsp. Durum (Desf.) Husn.]. Theoretical and Applied Genetics, 104, 350-357. http://dx.doi.org/10.1007/s001220100714
 
[11]Sajjad, M., Khan, S.H., Qadir, M., Rasheesd, A., Kazi, A.M. and Khan, I.A. (2014) Association Mapping Identifies QTLs on Wheat Chromosome 3A for Yield Related Traits. Cereal Research Communication, 42, 177-188. http://dx.doi.org/10.1556/CRC.2013.0061
 
[12]Gulnaz, S., Sajjad, M., Khaliq, I., Khan, A.S. and Khan, S.H. (2011) Relationship among Coleoptile Length, Plant Height and Tillering Capacity for Developing Improved Wheat Varieties. International Journal of Agriculture and Biology, 13, 130-133.
 
[13]Rogowsky, P.M., Guidet, F.L.Y., Langridge, P., Shepherd, K.W. and Koebner, R.D.M. (1991) Isolation and Characterization of Wheat-Rye Recombinants Involving Chromosome Arm 1DS of Wheat. Theoretical and Applied Genetics, 82, 537-544. http://dx.doi.org/10.1007/BF00226788
 
[14]Thomas, J. and Michael, P. (2010) Statistica. In: Salkind, N., Ed., Encyclopedia of Research Design, SAGE Publications, Inc., Thousand Oaks, 1443-1445. http://dx.doi.org/10.4135/9781412961288.n441  eww150114lx

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